LipidCircos can generate Circos plot based on the identified unmodified and corresponding oxidized phospholipids. The circos plot can visualize the relationships between unmodified phospholipids and their oxidation products, and thus can be used as an informative resource to investigate phospholipids remodeling under experiment conditions.
LipidCircos is a pure python program, which requires certain programing knowledge to perform the analysis. A more user-friendly version with graphic user interface will follow soon.
For more details of the algorithms behind LipidCircos software, please read our publication:
LPPtiger software for lipidome-specific prediction and identification of oxidized phospholipids from LC-MS datasets Zhixu Ni, Georgia Angelidou, Ralf Hoffmann, and Maria Fedorova Scientific Reports 7, Article number: 15138 (2017) DOI: 10.1038/s41598-017-15363-z
For more details about Circos plot, please visit: http://circos.ca
LipidCircos Source code version: https://bitbucket.org/SysMedOs/lipidcircos
LipidCircos is licensed under GPLv2 License: The GNU General Public License version 2